Submissions from 2010
Mitochondrial DNA polymerase POLIB is essential for minicircle DNA replication in African trypanosomes, DF Bruhn, B Mozeleski, L Falkin, and MM Klingbeil
Evolution of electron transfer out of the cell: comparative genomics of six Geobacter genomes, JE Butler, ND Young, and DR Lovley
Multiple bHLH proteins regulate CIT2 expression in Saccharomyces cerevisiae, LA Chen and JM Lopes
Microtoming coupled to microarray analysis to evaluate the spatial metabolic status of Geobacter sulfurreducens biofilms, AE Franks, KP Nevin, RH Glaven, and DR Lovley
Purification and Characterization of OmcZ, an Outer-Surface, Octaheme c-Type Cytochrome Essential for Optimal Current Production by Geobacter sulfurreducens, K Inoue, XL Qian, L Morgado, BC Kim, T Mester, M Izallalen, CA Salgueiro, and DR Lovley
The role of nano-scale heterogeneous electrostatic interactions in initial bacterial adhesion from flow: A case study with Staphylococcus aureus, S Kalasin, J Dabkowski, K Nusslein, and MM Santore
Alignment of the c-Type Cytochrome OmcS along Pili of Geobacter sulfurreducens, C Leang, XL Qian, T Mester, and DR Lovley
RecA4142 Causes SOS Constitutive Expression by Loading onto Reversed Replication Forks in Escherichia coli K-12, JE Long, SC Massoni, and SJ Sandler
De Novo Assembly of the Complete Genome of an Enhanced Electricity-Producing Variant of Geobacter sulfurreducens Using Only Short Reads, H Nagarajan, JE Butler, A Klimes, Y Qiu, K Zengler, J Ward, ND Young, BA Methe, BO Palsson, DR Lovley, and CL Barrett
Molecular analysis of phosphate limitation in Geobacteraceae during the bioremediation of a uranium-contaminated aquifer, AL N'Guessan, H Elifantz, KP Nevin, PJ Mouser, B Methe, T LWoodard, K Manley, KH Williams, MJ Wilkins, JT Larsen, PE Long, and DR Lovley
Biotechnological potential of aquatic plant-microbe interactions, L Stout and K Nusslein
Reductive dechlorination of 2-chlorophenol by Anaeromyxobacter dehalogenans with an electrode serving as the electron donor, SM Strycharz, SM Gannon, AR Boles, AE Franks, KP Nevin, and DR Lovley
Genome-wide gene regulation of biosynthesis and energy generation by a novel transcriptional repressor in Geobacter species, T Ueki and DR Lovley
Role of Geobacter sulfurreducens Outer Surface c-Type Cytochromes in Reduction of Soil Humic Acid and Anthraquinone-2,6-Disulfonate, JW Voordeckers, BC Kim, M Izallalen, and DR Lovley
Electrode-Based Approach for Monitoring In Situ Microbial Activity During Subsurface Bioremediation, KH Williams, KP Nevin, A Franks, A Englert, PE Long, and DR Lovley
Electrodic voltages accompanying stimulated bioremediation of a uranium-contaminated aquifer, KH Williams, AL N'Guessan, J Druhan, PE Long, SS Hubbard, DR Lovley, and JF Banfield
Stimulating the anaerobic degradation of aromatic hydrocarbons in contaminated sediments by providing an electrode as the electron acceptor, T Zhang, SM Gannon, KP Nevin, AE Franks, and DR Lovley
Modeling and sensitivity analysis of electron capacitance for Geobacter in sedimentary environments, J Zhao, YL Fang, TD Scheibe, DR Lovley, and R Mahadevan
Submissions from 2009
The genome sequence of Geobacter metallireducens: features of metabolism, physiology and regulation common and dissimilar to Geobacter sulfurreducens, M Aklujkar, J Krushkal, G DiBartolo, A Lapidus, ML Land, and DR Lovley
Microcosm-based Study of the Attenuation of an Acid Mine Drainage-Impacted Site through Biological Sulfate and Iron Reduction, CA Becerra, EL Lopez-Luna, SJ Ergas, and K Nusslein
Evolution from a respiratory ancestor to fill syntrophic and fermentative niches: comparative genomics of six Geobacteraceae species, JE Butler, ND Young, and DR Lovley
UvrD303, a Hyperhelicase Mutant That Antagonizes RecA-Dependent SOS Expression by a Mechanism That Depends on Its C Terminus, RC Centore, MC Leeson, and SJ Sandler
Hydrophilic Modifications of an Amphiphilic Polynorbornene and the Effects on its Hemolytic and Antibacterial Activity, S Colak, CF Nelson, K Nusslein, and GN Tew
Hierarchical Bayesian meta-analysis models for cross-platform microarray studies, EM Conlon, BL Postier, BA Methe, KP Nevin, and DR Lovley
Novel strategy for three-dimensional real-time imaging of microbial fuel cell communities: monitoring the inhibitory effects of proton accumulation within the anode biofilm, AE Franks, KP Nevin, HF Jia, M Izallalen, TL Woodard, and DR Lovley
Comparison of Facially Amphiphilic versus Segregated Monomers in the Design of Antibacterial Copolymers, GJ Gabriel, JA Maegerlein, CE Nelson, JM Dabkowski, T Eren, K Nusslein, and GN Tew
Single Molecule Analysis of a Red Fluorescent RecA Protein Reveals a Defect in Nucleoprotein Filament Nucleation That Relates to Its Reduced Biological Functions, N Handa, I Amitani, N Gumlaw, SJ Sandler, and SC Kowalczykowski
Polar lipid fatty acids, LPS-hydroxy fatty acids, and respiratory quinones of three Geobacter strains, and variation with electron acceptor, DB Hedrick, AD Peacock, DR Lovley, TL Woodard, KP Nevin, PE Long, and DC White
Potential Role of a Novel Psychrotolerant Member of the Family Geobacteraceae, Geopsychrobacter electrodiphilus gen. nov., sp. nov., in Electricity Production by a Marine Sediment Fuel Cell (vol 70, pg 6023, 2004), DE Holmes, JS Nicoll, DR Bond, and DR Lovley
Transcriptome of Geobacter uraniireducens growing in uranium-contaminated subsurface sediments, DE Holmes, RA O'Neil, MA Chavan, LA N'Guessan, HA Vrionis, LA Perpetua, MJ Larrahondo, R DiDonato, A Liu, and DR Lovley
Environmental Sequence Data from the Sargasso Sea Reveal That the Characteristics of Genome Reduction in Prochlorococcus Are Not a Harbinger for an Escalation in Genetic Drift, JH Hu and JL Blanchard
Regulated transcription of the Saccharomyces cerevisiae phosphatidylinositol biosynthetic gene, PIS1, yields pleiotropic effects on phospholipid synthesis, NM Jani and JM Lopes
PilR, a Transcriptional Regulator for Pilin and Other Genes Required for Fe(III) Reduction in Geobacter sulfurreducens, K Juarez, BC Kim, K Nevin, L Olvera, G Reguera, DR Lovley, and BA Methe
Unraveling the Secrets of Regulating Mitochondrial DNA Replication, MM Klingbeil and TA Shapiro
Diversity of promoter elements in a Geobacter sulfurreducens mutant adapted to disruption in electron transfer, J Krushkal, C Leang, J Barbe, YH Qu, B Yan, M Puljic, R Adkins, and D Lovley
Bioinformatic analysis of gene regulation in Geobacter sulfurreducens, J Krushkal, YH Qu, P Brown, S Sontineni, T Ueki, K Juarez, C Leang, E Merino, J Peeples, JF Barbe, RM Adkins, and DR Lovley
Genome-wide analysis of the RpoN regulon in Geobacter sulfurreducens, C Leang, J Krushkal, T Ueki, M Puljic, J Sun, K Juarez, C Nunez, G Reguera, R DiDonato, B Postier, RM Adkins, and DR Lovley
"Doubly Selective" Antimicrobial Polymers: How Do They Differentiate between Bacteria?, K Lienkamp, KN Kumar, A Som, K Nusslein, and GN Tew
Antimicrobial Polymers Prepared by Ring-Opening Metathesis Polymerization: Manipulating Antimicrobial Properties by Organic Counterion and Charge Density Variation, K Lienkamp, AE Madkour, KN Kumar, K Nusslein, and GN Tew
Suppression of constitutive SOS expression by recA4162 (I298V) and recA4164 (L126V) requires UvrD and RecX in Escherichia coli K-12, JE Long, N Renzette, and SJ Sandler
Fast Disinfecting Antimicrobial Surfaces, AE Madkour, JA Dabkowski, K Nusslein, and GN Tew
Quantifying expression of Geobacter spp. oxidative stress genes in pure culture and during in situ uranium bioremediation, PJ Mouser, DE Holmes, LA Perpetua, R DiDonato, B Postier, A Liu, and DR Lovley
Influence of Heterogeneous Ammonium Availability on Bacterial Community Structure and the Expression of Nitrogen Fixation and Ammonium Transporter Genes during in Situ Bioremediation of Uranium-Contaminated Groundwater, PJ Mouser, AL N'Guessan, H Elifantz, DE Holmes, KH Williams, MJ Wilkins, PE Long, and DR Lovley
Anode Biofilm Transcriptomics Reveals Outer Surface Components Essential for High Density Current Production in Geobacter sulfurreducens Fuel Cells, KP Nevin, BC Kim, RH Glaven, JP Johnson, TL Woodard, BA Methe, RJ DiDonato, SF Covalla, AE Franks, A Liu, and DR Lovley
GSEL Version 2, an Online Genome-Wide Query System of Operon Organization and Regulatory Sequence Elements of Geobacter sulfurreducens, YH Qu, P Brown, JF Barbe, M Puljic, E Merino, RM Adkins, DR Lovley, and J Krushkal
Cyclic voltammetry of biofilms of wild type and mutant Geobacter sulfurreducens on fuel cell anodes indicates possible roles of OmcB, OmcZ, type IV pili, and protons in extracellular electron transfer, H Richter, KP Nevin, HF Jia, DA Lowy, DR Lovley, and LM Tender
Genome-scale comparison and constraint-based metabolic reconstruction of the facultative anaerobic Fe(III)-reducer Rhodoferax ferrireducens, C Risso, J Sun, K Zhuang, R Mahadevan, R Deboy, W Ismail, S Shrivastava, H Huot, S Kothari, S Daugherty, O Bui, CH Schilling, DR Lovley, and BA Methe
Hydrogenotrophic Denitrification and Perchlorate Reduction in Ion Exchange Brines Using Membrane Biofilm Reactors, AK Sahu, T Conneely, K Nusslein, and SJ Ergas
Biological Perchlorate Reduction in Packed Bed Reactors Using Elemental Sulfur, AK Sahu, T Conneely, KR Nusslein, and SJ Ergas
Genome-scale constraint-based modeling of Geobacter metallireducens, J Sun, B Sayyar, JE Butler, P Pharkya, TR Fahland, I Famili, CH Schilling, DR Lovley, and R Mahadevan
Abundances of Hyperthermophilic Autotrophic Fe(III) Oxide Reducers and Heterotrophs in Hydrothermal Sulfide Chimneys of the Northeastern Pacific Ocean, HC Ver Eecke, DS Kelley, and JF Holden
Occurrence of Chlamydia trachomatis and Chlamydia pneumoniae in paediatric respiratory infections, WC Webley, Y Tilahun, K Lay, K Patel, ES Stuart, C Andrzejewski, and PS Salva
Occurrence of Chlamydia trachomatis and Chlamydia pneumoniae in paediatric respiratory infections, WC Webley, Y Tilahun, K Lay, K Patel, ES Stuart, C Andrzejewski, and PS Salva
Proteogenomic Monitoring of Geobacter Physiology during Stimulated Uranium Bioremediation, MJ Wilkins, NC VerBerkmoes, KH Williams, SJ Callister, PJ Mouser, H Elifantz, AL N'Guessan, BC Thomas, CD Nicora, MB Shah, P Abraham, MS Lipton, DR Lovley, RL Hettich, PE Long, and JF Banfield
Selection of a variant of Geobacter sulfurreducens with enhanced capacity for current production in microbial fuel cells, HN Yi, KP Nevin, BC Kim, AE Franks, A Klimes, LM Tender, and DR Lovley
Submissions from 2008
Investigating the Effect of Increasing Charge Density on the Hemolytic Activity of Synthetic Antimicrobial Polymers, ZM Al-Badri, A Som, S Lyon, CF Nelson, K Nusslein, and GN Tew
Relational learning in children with deafness and cochlear implants, AC Almeida-Verdu, EM Huziwara, DG De Souza, JC De Rose, M Cecilia-Bevilacqua, J Lopes, CO Alves, and WJ McIlvane
XthA (Exonuclease III) regulates loading of RecA onto DNA substrates in log phase Escherichia coli cells, RC Centore, R Lestini, and SJ Sandler
Stem-Loop Silencing Reveals that a Third Mitochondrial DNA Polymerase, POLID, Is Required for Kinetoplast DNA Replication in Trypanosomes, J Chandler, AV Vandoros, B Mozeleski, and MM Klingbeil
Quantifying expression of a dissimilatory (bi) sulfite reductase gene in petroleum-contaminated marine Harbor Sediments, KJ Chin, ML Sharma, LA Russell, KR O'Neill, and DR Lovley
Proteome of Geobacter sulfurreducens grown with Fe(III) oxide or Fe(III) citrate as the electron acceptor, YHR Ding, KK Hixson, MA Aklujkar, MS Lipton, RD Smith, DR Lovley, and T Mester
Antibacterial and hemolytic activities of quaternary pyridinium functionalized polynorbornenes, T Eren, A Som, JR Rennie, CF Nelson, Y Urgina, K Nusslein, EB Coughlin, and GN Tew
Fluorescent properties of c-type cytochromes reveal their potential role as an extracytoplasmic electron sink in Geobacter sulfurreducens, A Esteve-Nunez, J Sosnik, P Visconti, and DR Lovley
Constraints on anaerobic respiration in the hyperthermophilic archaea Pyrobaculum islandicum and Pyrobaculum aerophilum, LF Feinberg, R Srikanth, RW Vachet, and JF Holden
A new model linking atmospheric methane sources to Pleistocene glaciation via methanogenesis in sedimentary basins, MJ Formolo, JM Salacup, ST Petsch, AM Martini, and K Nusslein
Synthetic Mimic of Antimicrobial Peptide with Nonmembrane-Disrupting Antibacterial Properties, GJ Gabriel, AE Madkour, JM Dabkowski, CF Nelson, K Nusslein, and GN Tew
RecA-mediated SOS induction requires an extended filament conformation but no ATP hydrolysis, MC Gruenig, N Renzette, E Long, S Chitteni-Pattu, RB Inman, MM Cox, and SJ Sandler
Genome-wide gene expression patterns and growth requirements suggest that Pelobacter carbinolicus reduces Fe(III) indirectly via sulfide production, SA Haveman, RJ DiDonato, L Villanueva, ES Shelobolina, BL Postier, B Xu, A Liu, and DR Lovley
Genes for two multicopper proteins required for Fe(III) oxide reduction in Geobacter sulfurreducens have different expression patterns both in the subsurface and on energy-harvesting electrodes, DE Holmes, T Mester, RA O'Neil, LA Perpetua, MJ Larrahondo, R Glaven, ML Sharma, JE Ward, KP Nevin, and DR Lovley
Geobacter sulfurreducens strain engineered for increased rates of respiration, M Izallalen, R Mahadevan, A Burgard, B Postier, R Didonato, J Sun, CH Schilling, and DR Lovley
Transcription regulation of the Saccharomyces cerevisiae PIS1 gene by inositol and the pleiotropic regulator, Ume6p, NM Jani and JM Lopes
Characterization of extracellular minerals produced during dissimilatory Fe(III) and U(VI) reduction at 100 degrees C by Pyrobaculum islandicum, K Kashefi, BM Moskowitz, and DR Lovley
Growth of thermophilic and hyperthermophilic Fe (III)-reducing microorganisms on a ferruginous smectite as the sole electron acceptor, K Kashefi, ES Shelobolina, WC Elliott, and DR Lovley
Investigation of direct vs. indirect involvement of the c-type cytochrome MacA in Fe(III) reduction by Geobacter sulfurreducens, BC Kim and DR Lovley
Insights into genes involved in electricity generation in Geobacter sulfurreducens via whole genome microarray analysis of the OmcF-deficient mutant, BC Kim, BL Postier, RJ DiDonato, SK Chaudhuri, KP Nevin, and DR Lovley
Insights into genes involved in electricity generation in Geobacter sulfurreducens via whole genome microarray analysis of the OmcF-deficient mutant (vol 73, pg 70, 2008), BC Kim, BL Postier, RJ Didonato, SK Chaudhuri, KR Nevin, and DR Lovley
Growth with high planktonic biomass in Shewanella oneidensis fuel cells, M Lanthier, KB Gregory, and DR Lovley
Antimicrobial polymers prepared by ROMP with unprecedented selectivity: A molecular construction kit approach, K Lienkamp, AE Madkour, A Musante, CF Nelson, K Nusslein, and GN Tew
Differential Requirements of Two recA Mutants for Constitutive SOS Expression in Escherichia coli K-12, JE Long, N Renzette, RC Centore, and SJ Sandler
Extracellular electron transfer: wires, capacitors, iron lungs, and more, DR Lovley
The microbe electric: conversion of organic matter to electricity, DR Lovley
The degree of redundancy in metabolic genes is linked to mode of metabolism, R Mahadevan and DR Lovley
Biogeochemistry of the Forest City Basin coalbed methane play, J McIntosh, A Martini, S Petsch, R Huang, and K Nusslein
Power output and columbic efficiencies from biofilms of Geobacter sulfurreducens comparable to mixed community microbial fuel cells, KP Nevin, H Richter, SF Covalla, JP Johnson, TL Woodard, AL Orloff, H Jia, M Zhang, and DR Lovley
Sustained removal of uranium from contaminated groundwater following stimulation of dissimilatory metal reduction, AL N'Guessan, HA Vrionis, CT Resch, PE Long, and DR Lovley
GEOC 35-Biogeochemical differences in pilot-scale bioremediation treatment plots undergoing iron reduction or sulfate reduction in a uranium-contaminated aquifer, AL N'Guessan, KH Williams, S Yabusaki, PE Long, and DR Lovley
Gene transcript analysis of assimilatory iron limitation in Geobacteraceae during groundwater bioremediation, RA O'Neil, DE Holmes, MV Coppi, LA Adams, MJ Larrahondo, JE Ward, KP Nevin, TL Woodard, HA Vrionis, AL N'Guessan, and DR Lovley
Uptake and intra-inclusion accumulation of exogenous immunoglobulin by Chlamydia-infected cells, DV Pollack, NL Croteau, and ES Stuart
Benefits of in-situ synthesized microarrays for analysis of gene expression in understudied microorganisms, B Postier, R DiDonato, KP Nevin, A Liu, B Frank, D Lovley, and BA Methe
Requirements for ATP binding and hydrolysis in RecA function in Escherichia coli, N Renzette and SJ Sandler
Electricity generation by Geobacter sulfurreducens attached to gold electrodes, H Richter, K McCarthy, KP Nevin, JP Johnson, VM Rotello, and DR Lovley
Highly conserved genes in Geobacter species with expression patterns indicative of acetate limitation, C Risso, BA Methe, H Elifantz, DE Holmes, and DR Lovley
Elucidation of an alternate isoleucine biosynthesis pathway in Geobacter sulfurreducens, C Risso, SJ Van Dien, A Orloff, DR Lovley, and MV Coppi
Computational and experimental analysis of redundancy in the central metabolism of Geobacter sulfurreducens, D Segura, R Mahadevan, K Juarez, and DR Lovley
Geobacter uraniireducens sp nov., isolated from subsurface sediment undergoing uranium bioremediation, ES Shelobolina, HA Vrionis, RH Findlay, and DR Lovley
Recombinant gas vesicles from Halobacterium sp. displaying SIV peptides demonstrate biotechnology potential as a pathogen peptide delivery vehicle, M Sremac and ES Stuart
Graphite electrode as a sole electron donor for reductive dechlorination of tetrachlorethene by Geobacter lovleyi, SM Strycharz, TL Woodard, JP Johnson, KP Nevin, RA Sanford, FE Loffler, and DR Lovley
Comparative genomics of Geobacter chemotaxis genes reveals diverse signaling function, HT Tran, J Krushkal, FM Antommattei, DR Lovley, and RM Weis
Quantification of Desulfovibrio vulgaris dissimilatory sulfite reductase gene expression during electron donor- and electron acceptor-limited growth, L Villanueva, SA Haveman, ZM Summers, and DR Lovley
Submissions from 2007
Steady state protein levels in Geobacter metallireducens grown with iron (III) citrate or nitrate as terminal electron acceptor, AJ Ahrendt, SL Tollaksen, C Lindberg, WH Zhu, JR Yates, KP Nevin, G Babnigg, DR Lovley, and CS Giometti