Four experiments were conducted from 2009-2012. Twelve varieties were tested to determine their viability in the Massachusetts climate. Five were chosen for further chemical analysis. All varieties were harvested in August (senescence), November (killing frost), and April (early spring). A high yielding variety, Cave-in-Rock, known to grow well in northern latitudes, was chosen for more extensive research. In one experiment, a young stand, three years old, received three nitrogen treatments, was cut at two heights, and was harvested at three different times during the year. A mature stand, seven years old, of the same variety located on conservation land, was harvested three times at two cutting heights. These experiments were done to provide projections on the expected yields over the plant's 10 to 20 year life cycle. In our final experiment Switchgrass was harvested every two weeks from September to November. A caliometer tracked how much energy was present in the dry matter throughout the growing season. Dry matter yield, chemical constituents, and carbohydrate reserves in the below ground tissues were measured as indicator variables to determine the health and quality of yield. Harvest time was the most significant variable observed.

The results suggest that delay from critical planting date (CPD) will decrease rye N uptake dramatically. Suggested CPDs for northwest parts of Massachusetts are not applicable because they are too early (third to fourth week of August). CPDs for central parts of the State are from first to second week of September. Farmers in these zones can take advantage of cover crop by a better time management and planting no later than vii CPD. In Eastern areas of Massachusetts CPD is the third week of September. By evaluating the effect of planting date on rye growth and N accumulation throughout the State, this model provides a powerful decision making tool for increasing N recovery and reducing nutrient leaching.

Sixteen units of cost effective and accurate automated lysimeters were designed and installed to measure post-harvest nitrate leaching from a rye cover crop field during the falls and winters of 2007 to 2009. The electronic system was designed to monitor soil tension and apply the equal amount of suction to the sampling media. Hourly data from soil tension and vacuum applied to the system were collected and stored by each unit. A safety system was designed for protecting vacuum pump against unexpected major vacuum leakage events. The controller can be easily reprogrammed for different performance strategies. Other major parts of lysimeter included the power supply systems, vacuum pump, vacuum tanks, sampling jars, suction cups and plates, and electronic valves. The electronic system showed a very reliable and accurate performance in the field condition.

The effects of oxide NPs on bacteria cells and bacterial surface biomolecules were studied by FTIR spectroscopy to provide a better understanding of their cytotoxicity. Lipopolysaccharide (LPS) and lipoteichoic acid could bind to oxide NPs through hydrogen bonding and ligand exchange, but the cytotoxicity of NPs seemed largely related to the function-involved or structural changes to proteins and phospholipids. The three NPs decreased the intensity ratio of β-sheets/α-helices, indicating protein structure change, which may affect cell physiological activities. The phosphodiester bond of L-α- Phosphatidyl-ethanolamine (PE) was broken by ZnO NPs, forming phosphate monoesters and resulting in the highly disordered alkyl chain. Such damage to phospholipid molecular structure may lead to membrane rupture and cell leaking, which is consistent with the fact that ZnO is the most toxic of the three NPs.

LPS and PE are amphiphilic biomolecules that are major constituents of the outer membrane of Gram-negative bacteria. Their micelles and vesicles were studied as model cell membranes to evaluate NP effects on membrane construction. The adsorption of polysaccharides on Al2O3 and TiO2 NPs dispersed LPS vesicles and micelles. LPS coated Al2O3 NPs, while it caused the aggregation of TiO2 NPs according to atom force microscopy images. Desorption from the two NPs was slow due to the firm hydrogen bonding. For PE, Al2O3 NPs induced large multilamillar vesicles, while ZnO NP converted vesicles to tiny aggregates due to molecular structure breakup. PE stability in solution was disturbed by adding NPs, but its stability was enhanced by increasing pH. The electrostatic force was the determining factor for the vesicle stability.