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Submissions from 2024

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Separable graph Hamiltonian network: A graph deep learning model for lattice systems, Hong-Kun Zhang and et. al.

Submissions from 2023

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Dynamic instability of 3D stationary and traveling planar dark solitons, Thudiyangal Mithun, A. R. Fritsch, I. B. Spielman, and Panayotis G. Kevrekidis

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Investigating the spatial interaction of immune cells in colon cancer, Navid Mohammad Mirzaei, Wenrui Hao, and Leili Shahriyari

Submissions from 2022

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Efficient Manipulation of Bose-Einstein Condensates in a Double-Well Potential, J. Adriazola, R. H. Goodman, and Panayotis G. Kevrekidis

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Two-Component 3D Atomic Bose-Einstein Condensates Support Complex Stable Patterns, N. Boullé, I. Newell, P. E. Farrell, and Panayotis G. Kevrekidis

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Dirac Solitons and Topological Edge States in the β-Fermi-Pasta-Ulam-Tsingou dimer lattice, Rajesh Chaunsali, Panayotis G. Kevrekidis, Dimitri Frantzeskakis, and Georgios Theocharis

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Dispersive Shock Waves in Lattices: A Dimension Reduction Approach, Christopher Chong, Michael Herrman, and Panayotis G. Kevrekidis

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Solitary wave billiards, Jesús Cuevas-Maraver, Panayotis G. Kevrekidis, and Hongkun Zhang

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Discrete breathers in a mechanical metamaterial, Henry Duran, Jesús Cuevas-Maraver, Panayotis G. Kevrekidis, and Anna Vainchtein

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An Ising machine based on networks of subharmonic electrical resonators, L. Q. English, A. V. Zampetaki, K. P. Kalinin, N. G. Berloff, and Panayotis G. Kevrekidis

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Asymptotic dynamics of higher-order lumps in the Davey-Stewartson II equation, Lijuan Guo, Panayotis G. Kevrekidis, and Jingsong He

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Control of 164Dy Bose-Einstein condensate phases and dynamics with dipolar anistropy, S. Halder, K. Mukherjee, S. I. Mistakidis, S. Das, Panayotis G. Kevrekidis, P. K. Panigrahi, S. Majumder, and H. R. Sadeghpour

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Schwarzschild-Finsler-Randers spacetime: Dynamical analysis, Geodesics and Deflection Angle, E. Kapsabelis, Panayotis G. Kevrekidis, P. C. Stavrinos, and A. Triantafyllopoulos

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Breathers in lattices with alternating strain-hardening and strain-softening interactions, Marisa M. Lee, Efstathios G. Charalampidis, Siyuan Xing, Christopher Chong, and Panayotis G. Kevrekidis

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Characterization of elastic topological states using dynamic mode decomposition, Shuaifeng Li, Panayotis G. Kevrekidis, and Jinkyu Yang

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How close are Integrable and Non-integrable Models: A Parametric Case Study Based on the Salerno Model, Thudiyangal Mithun, Aleksandra Maluckov, Ana Mančić, Avinash Khare, and Panayotis G. Kevrekidis

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Dense dark-bright soliton arrays in a two-component Bose-Einstein condensate, S. Mossman, G. C. Katsimiga, S. I. Mistakidis, A. Romero-Ros, T. M. Bersano, P. Schmelcher, Panayotis G. Kevrekidis, and P. Engels

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Revisiting Multi-breathers in the discrete Klein-Gordon equation: A Spatial Dynamics Approach, Ross Parker, Jesús Cuevas-Maraver, Panayotis G. Kevrekidis, and Alejandro Aceves

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The role of mobility in the dynamics of the COVID-19 epidemic in Andalusia, Z. Rapti, Jesús Cuevas-Maraver, E. Kontou, S. Liu, Y. Drossinos, Panayotis G. Kevrekidis, G. A. Kevrekidis, M. Barmann, and Q.-Y. Chen

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Dragging A Defect in a Droplet Bose-Einstein Condensate, Sheikh Saqlain, Thudiyangal Mithun, R. Carretero-González, and Panayotis G. Kevrekidis

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Discovering Governing Equations in Discrete Systems Using PINNs, Sheikh Saqlain, Wei Zhu, Efstathios G. Charalampidis, and Panayotis G. Kevrekidis

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Exploring approaches for predictive cancer patient digital twins: Opportunities for collaboration and innovation, Eric A. Stahlberg, Mohamed Abdel-Rahman, Boris Aguilar, Alireza Asadpoure, Robert A. Beckman, Lynn L. Borkon, Jeffrey N. Bryan, Colleen M. Cebulla, Young Hwan Chang, Ansu Chatterjee, Jun Deng, Sepideh Dolatshahi, Olivier Gevaert, Emily J. Greenspan, Wenrui Hao, Tina Hernandez-Boussard, Pamela R. Jackson, Marieke Kuijjer, Adrian Lee, Paul Macklin, Subha Madhavan, Matthew D. McCoy, Navid Mohammad Mirzaei, Talayeh Razzaghi, Heber L. Rocha, Leili Shahriyari, Ilya Shmulevich, Daniel G. Stover, Yi Sun, Tanveer Syeda-Mahmood, Jinhua Wang, Qi Wang, and Ioannis Zervantonakis

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Kink-Antikink Interaction Forces and Bound States in a φ4 Model with Quadratic and Quartic dispersion, G. A. Tsolias, Robert J. Decker, A. Demirkaya, T. J. Alexander, Ross Parker, and Panayotis G. Kevrekidis

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Modelling of spatial infection spread through heterogeneous population: from lattice to partial differential equation models, Arvin Vaziry, T. Kolokolnikov, and P. G. Kevrekidis

Submissions from 2021

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Refinements and Symmetries of the Morris identity for volumes of flow polytopes, Alejandro H. Borrero and William Shi

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Data Driven Mathematical Model of FOLFIRI Treatment for Colon Cancer, Aparajita Budithi, Sumeyye Su, Arkadz Kirshtein, and Leili Shahriyari

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Easing COVID-19 Lockdown Measures While Protecting the Older Restricts the Deaths to the Level of the Full Lockdown, A. S. Fokas, J. Cuevas-Maraver, and P. G. Kevrekidis

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Generalized Catalan Numbers from Hypergraphs, Paul E. Gunnells

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Phase Diagram, Stability and Magnetic Properties of Nonlinear Excitations in Spinor Bose–Einstein Condensates, G. C. Katsimiga, S. I. Mistakidis, P. Schmelcher, and P. G. Kevrekidis

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Investigating Optimal Chemotherapy Options for Osteosarcoma Patients through a Mathematical Model, Trang M. Le, Sumeyye Su, and Leili Shahriyari

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Data-Driven Mathematical Model of Osteosarcoma, Trang Le, Sumeyye Su, Arkadz Kirshtein, and Leili Shahriyari

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Immune Classification of Osteosarcoma, Trang Le, Sumeyye Su, and Leili Shahriyari

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Unraveling the Mechanisms of Surround Suppression in Early Visual Processing, Yao Li and Lai-Sang Young

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A Mathematical Model of Breast Tumor Progression Based on Immune Infiltration, Navi Mohammad Mirzaei, Sumeyye Su, Dilruba Sofia, Maura Hegarty, Mohamed H. Abel-Rahman, Alireza Asadpoure, Colleen M. Cebulla, Young Hwan Chang, Wenrui Hao, Pamela R. Jackson, Adrian V. Lee, Daniel G. Stover, Zuzana Tatarova, Ioannis K. Zervantonakis, and Leili Shahriyari

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Formation and quench of homonuclear and heteronuclear quantum droplets in one dimension, Simeon I. Mistakadis, Mithun Thudiyangal, Panayotis Kevrekidis, H. R. Sadeghpour, and Peter Schmelcher

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Immune classification of clear cell renal cell carcinoma, Sumeyye Su, Shaya Akbarinejad, and Leili Shahriyari

Submissions from 2020

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Correcting for differential recruitment in respondent-driven sampling data using ego-network information, Isabelle S. Beaudry and Krista J. Gile

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Casting dissipative compact states in coherent perfect absorbers, Carlo Danieli and Mithun Thudiyangal

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Relating Nets and Factorization Algebras of Observables: Free Field Theories, Owen Gwilliam and Kasia Rejzner

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Systematic Coarse-Grained Models for Molecular Systems Using Entropy †, Evangelina Kalligiannaki, Vagelis Harmandaris, and Markos Katsoulakis

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Breather stripes and radial breathers of the two-dimensional sine-Gordon equation, Panayotis G. Kevrekidis, R. Carretero-González, J. Cuevas-Maraver, D. J. Frantzeskakis, J.-G. Caputo, and B. A. Malomed

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Data Driven Mathematical Model of Colon Cancer Progression, Arkadz Kirshtein, Shaya Akbarinejad, Wenrui Hao, Trang Le, Sumeyye Su, Rachel A. Aronow, and Leili Shahriyari

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Modulational Instability, Inter-Component Asymmetry, and Formation of Quantum Droplets in One-Dimensional Binary Bose Gases, Thudiyangal Mithun, Aleksandra Maluckov, Kenichi Kasamatsu, Boris A. Malomed, and Avinash Khare

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Correcting an estimator of a multivariate monotone function with isotonic regression, Ted Westling, Mark J. van der Laan, and Marco Carone

Submissions from 2019

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The bullet problem with discrete speeds, Brittany Dygert, Christoph Kinzel, Matthew Junge, Annie Raymond, Erik Slivken, and Jennifer Zhu

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Alignment strength and correlation for graphs, Donniell E. Fishkind, Lingyao Meng, Ao Sun, Carey E. Priebe, and Vince Lyzinski

Submissions from 2018

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Stability of periodic orbits in no-slip billiards, C. Cox, R. Feres, and Hongkun Zhang

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Conditional genetic screen in Physcomitrella patens reveals a novel microtubule depolymerizing-end-tracking protein, Xinxin Ding, Leah M. Pervere, Carl Bascom Jr., Jeffrey P. Bibeau, Sakshi Khurana, Allison M. Butt, Roger G. Orr, Patrick Flaherty, Magdalena Bezanilla, and Luis Vidali

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Reduced Models of Point Vortex Systems, Jonathan Maack and Bruce Turkington

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The Turán Polytope, Annie Raymond

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Dynamics of Dirac solitons in networks, K K Sabirov, D B Babajanov, D U Matrasulov, and P G Kevrekidis

Submissions from 2017

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Existence, Stability and Dynamics of Nonlinear Modes in a 2D PartiallyPT Symmetric Potential, Jennie D’Ambroise and Panayotis G. Kevrekidis

Submissions from 2016

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Collapse for the Higher-order Nonlinear Schrödinger Equation, V. Achilleos, S. Diamantidis, D. J. Frantzeskakis, T. P. Horikis, N. I. Karachalios, and P. G. Kevrekidis

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A PT -Symmetric Dual-Core System with the Sine-Gordon Nonlinearity and Derivative Coupling, Jesús Cuevas-Maraver, Boris A. Malomed, and Panayotis Kevrekidis

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A PT -Symmetric Dual-Core System with the Sine-Gordon Nonlinearity and Derivative Coupling, Jesús Cuevas-Maraver, Boris A. Malomed, and Panayotis G. Kevrekidis

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A PT-symmetric dual-core system with the sine-Gordon nonlinearity and derivative coupling, Jesus Cuevas-Maraver, Boris Malomed, and Panos Kevrekidis

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GEMINI: a computationally-efficient search engine for large gene expression datasets, Timothy DeFreitas, Hachem Saddiki, and Patrick Flaherty

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Discrete Solitons and Vortices in Anisotropic Hexagonal and Honeycomb Lattices, Q E. Hoq, Panayotis G. Kevrekidis, and A R. Bishop

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Dark-bright soliton interactions beyond the integrable limit, G. Katsimiga, J. Stockhofe, Panos Kevrekidis, and P. Schmelcher

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Energy criterion for the spectral stability of discrete breathers, Panos Kevrekidis, Jesus Cuevas-Maraver, and Dmitry Pelinovsky

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Vector Dark-Antidark Solitary Waves in Multi-Component Bose-Einstein condensates, Panos Kevrekidis, I. Danaila, M. Khamehchi, V. Gokhroo, and P. Engels

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Scattering of Waves by Impurities in Precompressed Granular Chains, Panos Kevrekidis, Alejandro Martinez, Hiromi Yasuda, Eunho Kim, Mason Porter, and Jinkyu Yang

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Performing Hong-Ou-Mandel-type Numerical Experiments with Repulsive Condensates: The case of Dark and Dark-bright Solitons, Panos Kevrekidis, Zhi-Yuan Sun, and Peter Kruger

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Multifrequency and Edge Breathers in the Discrete Sine-Gordon System via Subharmonic Driving: Theory, Computation and Experiment, F. Palmero, J. Han, L. Q. English, T. J. Alexander, and P. G. Kevrekidis

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Dark Spherical Shell Solitons in Three-Dimensional Bose-Einstein Condensates: Existence, Stability and Dynamics, Wenlong Wang, Panayotis G. Kevrekidis, R. Carretero-González, and D. J. Frantzeskakis

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Reverse Chemical Genetics: Comprehensive Fitness Profiling Reveals the Spectrum of Drug Target Interactions, Lai H. Wong, Sunita Sinha, Julian R. Bergeron, Joseph C. Mellor, Guri Giaever, Patrick Flaherty, and Corey Nislow

Submissions from 2015

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Positive and Negative Mass Solitons in Spin-Orbit Coupled Bose-Einstein Condensates, V. Achilleos, D.J. Frantzeskakis, P. G. Kevrekidis, P. SCHMELCHER, and J. STOCKHOFE

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Bose-Einstein Condensation: Twenty Years After, V. S. Bagnato, D.J. Frantzeskakis, P. G. Kevrekidis, B. A. Malomed, and D. MIHALACHE

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Robust Vortex Lines, Vortex Rings and Hopfions in Three-Dimensional Bose-Einstein Condensates, R. N. Bisset, Wenlong Wang, C. Ticknor, R Carretero-González, D. J. Frantzeskakis, L. A. Collins, and Panayotis G. Kevrekidis

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Bifurcation and Stability of Single and Multiple Vortex Rings in Three-Dimensional Bose-Einstein Condensates, R. N. Bisset, Wenlong Wang, C. Ticknor, R. Carretero-González, D. J. Frantzeskakis, L. A. Collins, and P. G. Kevrekidis

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Vortex Nucleation in a Dissipative Variant of the Nonlinear Schrödinger Equation Under Rotation, R. Carretero-González, Panayotis G. Kevrekidis, and T. Kolokolnikov

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Exciting and Harvesting Vibrational States in Harmonically Driven Granular Chains, Efstathios G. Charalampidis, Christopher Chong, Eunho Kim, Heetae Kim, F. Li, Panayotis G. Kevrekidis, J. Lydon, Chiara Daraio, and Jianke Yang

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Lattice Three-Dimensional Skyrmions Revisited, E G. Charalampidis, T A. Ioannidou, and Panayotis G. Kevrekidis

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Vortex–Soliton Complexes in Coupled Nonlinear Schrödinger Equations With Unequal Dispersion Coefficients, E. G. Charalampidis, Panayotis G. Kevrekidis, D. J. Frantzeskakis, and B. A. Malomed

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Dark bright solitons in coupled nonlinear Schrodinger equations with unequal dispersion coefficients, E. G. Charalampidis, P. G. Kevrekidis, D. J. Frantzeskaki, and B. A. Malomed

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Time-Periodic Solutions of Driven-Damped Trimer Granular Crystals, E. G. Charalampidis, F. Li, C. Chong, J. Yang, and Panayotis G. Kevrekidis

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Conical Wave Propagation and Diffraction in 2D Hexagonally Packed Granular Lattices, C. Chong, P. G. Kevrekidis, M. J. Ablowitz, and Yi-Ping Ma

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Exciting and Harvesting Vibrational States in Harmonically Driven Granular Chains, C. Chong, E. Kim, E. G. Charalampidis, H. Kim, F. Li, Panayotis G. Kevrekidis, J. Lydon, C. Daraio, and J. Yang

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Nonlinear Instabilities of Multi-Site Breathers in Klein–Gordon Lattices, Jesús Cuevas Maraver, Panayotis G. Kevrekidis, and Dmitry E. Pelinovsky

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Solitary Waves in a Discrete Nonlinear Dirac Equation, Jesús Cuevas–Maraver, Panayotis G. Kevrekidis, and Avadh Saxena

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Solitary Waves of a PT-Symmetric Nonlinear Dirac Equation, Jesús Cuevas–Maraver, Panayotis G. Kevrekidis, Avadh Saxena, Fred Cooper, Avinash Khare, Andrew Comech, and Carl M. Bender

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Stability of Solitary Waves and Vortices in a 2D Nonlinear Dirac Model, Jesús Cuevas–Maraver, P. G. Kevrekidis, Avadh Saxena, Andrew Comech, and Ruomeng Lan

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A PT-Symmetric Dual-Core System With the Sine-Gordon Nonlinearity and Derivative Coupling, Jesús Cuevas Maraver, Boris Malomed, and Panayotis Kevrekidis

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Staggered Parity-Time-Symmetric Ladders With Cubic Nonlinearity, Jennie D'Ambroise, Panayotis G. Kevrekidis, and B. A. Malomed

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Multidimensional Discrete Compactons in Nonlinear Schrödinger Lattices with Strong Nonlinearity Management, J. D'Ambroise, M. Salerno, P. G. Kevrekidis, and F. Kh. Abdullaev

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Traveling Wave Solutions in a Chain of Periodically Forced Coupled Nonlinear Oscillators, M. Duanmu, N. Whitaker, P. G. Kevrekidis, A. Vainchtein, and J. Rubin

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Robust Optimization of Biological Protocols, Patrick Flaherty and Ronald W. Davis

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Identification of a new class of antifungals targeting the synthesis of fungal sphingolipids, Patrick Flaherty and et. al.

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Effects of Interactions on the Generalized Hong–Ou–Mandel Effect, B. Gertjerenken and P. G. Kevrekidis

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Generating and Manipulating Quantized Vortices On-Demand in a Bose-Einstein Condensate: a Numerical Study, B. Gertjerenken, P. G. Kevrekidis, R. Carretero-González, and B. P. Anderson

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RVD2: an ultra-sensitive variant detection model for low-depth heterogeneous next-generation sequencing data, Yuting He, Fan Zhang, and Patrick Flaherty

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Bright Discrete Solitons in Spatially Modulated DNLS Systems, Panayotis G. Kevrekidis, R. L. Horne, N. Whitaker, Q. E. Hoq, and D. Kip

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Non-Holonomic Constraints and Their Impact on Discretizations of Klein-Gordon Lattice Dynamical Models, Panayotis G. Kevrekidis, Vakhtang Putkaradze, and Zoi Rapti

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Traveling Waves for the Mass in Mass Model of Granular Chains, Panayotis G. Kevrekidis, Atanas G. Stefanov, and Haitao Xu

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PT Meets Supersymmetry and Nonlinearity: An Analytically Tractable Case Example, P. G. Kevrekidis, Jesús Cuevas–Maraver, Avadh Saxena, Fred Cooper, and Avinash Khare

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Solitons in Multi-Component Nonlinear Schrödinger Models: A Survey of Recent Developments, P. G. Kevrekidis and D. J. Frantzeskakis

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Nonlinear Low-to-High-Frequency Energy Cascades in Diatomic Granular Crystals, E. Kim, R. Chaunsali, H. Xu, J. Jaworski, J. Yang, P. G. Kevrekidis, and A. F. Vakakis

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Nonlinear Waves in a Strongly Nonlinear Resonant Granular Chain, Lifeng Liu, Guillaume James, Panayotis Kevrekidis, and Anna Vainchtein

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Superdiffusive Transport and Energy Localization in Disordered Granular Crystals, Alejandro J. Martínez, Panayotis G. Kevrekidis, and Mason A. Porter

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Nonlinear Resonances and Antiresonances of a Forced Sonic Vacuum, D. Pozharskiy, Y. Zhang, M. O. Williams, D. M. McFarland, P. G. Kevrekidis, A. F. Vakakis, and I. G. Kevrekidis